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Chryseobacterium camelliae sp. nov., isolated from green tea
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| Zeitschriftentitel: | International Journal of Systematic and Evolutionary Microbiology |
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| Personen und Körperschaften: | , , , |
| In: | International Journal of Systematic and Evolutionary Microbiology, 64, 2014, Pt_3, S. 851-857 |
| Format: | E-Article |
| Sprache: | Englisch |
| veröffentlicht: |
Microbiology Society
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| Schlagwörter: |
| author_facet |
Kook, MooChang Son, Heung-Min Ngo, Hien T. T. Yi, Tae-Hoo Kook, MooChang Son, Heung-Min Ngo, Hien T. T. Yi, Tae-Hoo |
|---|---|
| author |
Kook, MooChang Son, Heung-Min Ngo, Hien T. T. Yi, Tae-Hoo |
| spellingShingle |
Kook, MooChang Son, Heung-Min Ngo, Hien T. T. Yi, Tae-Hoo International Journal of Systematic and Evolutionary Microbiology Chryseobacterium camelliae sp. nov., isolated from green tea General Medicine Ecology, Evolution, Behavior and Systematics Microbiology |
| author_sort |
kook, moochang |
| spelling |
Kook, MooChang Son, Heung-Min Ngo, Hien T. T. Yi, Tae-Hoo 1466-5026 1466-5034 Microbiology Society General Medicine Ecology, Evolution, Behavior and Systematics Microbiology http://dx.doi.org/10.1099/ijs.0.057398-0 <jats:p>A Gram-staining-negative, strictly aerobic, non-motile, rod-shaped and flexirubin-type-pigmented strain, THG C4-1<jats:sup>T</jats:sup>, was isolated from green tea leaves in Jangheung-gun, Republic of Korea. Strain THG C4-1<jats:sup>T</jats:sup> grew well at 20–30 °C, at pH 7.0–7.5 and in the absence of NaCl on nutrient agar. Based on 16S rRNA gene sequence comparisons, strain THG C4-1<jats:sup>T</jats:sup> was most closely related to <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.10254" xlink:type="simple"> <jats:italic>Chryseobacterium taiwanense</jats:italic> </jats:ext-link> </jats:named-content> Soil-3-27<jats:sup>T</jats:sup> (97.7 %), <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.20322" xlink:type="simple"> <jats:italic>C. hagamense</jats:italic> </jats:ext-link> </jats:named-content> RHA2-9<jats:sup>T</jats:sup> (97.2 %), <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.13275" xlink:type="simple"> <jats:italic>C. gregarium</jats:italic> </jats:ext-link> </jats:named-content> P 461/12<jats:sup>T</jats:sup> (97.2 %), <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.21849" xlink:type="simple"> <jats:italic>C. ginsenosidimutans</jats:italic> </jats:ext-link> </jats:named-content> THG 15<jats:sup>T</jats:sup> (97.1 %), <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.9911" xlink:type="simple"> <jats:italic>C. taeanense</jats:italic> </jats:ext-link> </jats:named-content> PHA3-4<jats:sup>T</jats:sup> (97.0 %) and <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.10660" xlink:type="simple"> <jats:italic>C. daeguense</jats:italic> </jats:ext-link> </jats:named-content> K105<jats:sup>T</jats:sup> (97.0 %), but DNA–DNA relatedness between strain THG C4-1<jats:sup>T</jats:sup> and its closest phylogenetic neighbours was below 21 %. The DNA G+C content was 41.7 mol%. The only isoprenoid quinone detected in strain THG C4-1<jats:sup>T</jats:sup> was menaquinone 6 (MK-6). The major component of the polyamine pattern was <jats:italic>sym</jats:italic>-homospermidine. The major polar lipids were phosphatidylethanolamine and unidentified aminolipids. The major fatty acids were iso-C<jats:sub>15 : 0</jats:sub>, iso-C<jats:sub>17 : 0</jats:sub> 3-OH and iso-C<jats:sub>17 : 1</jats:sub>ω9<jats:italic>c</jats:italic>. These data supported the affiliation of strain THG C4-1<jats:sup>T</jats:sup> to the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.8147" xlink:type="simple"> <jats:italic>Chryseobacterium</jats:italic> </jats:ext-link> </jats:named-content>. The results of physiological and biochemical tests enabled strain THG C4-1<jats:sup>T</jats:sup> to be differentiated genotypically and phenotypically from recognized species of the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.8147" xlink:type="simple"> <jats:italic>Chryseobacterium</jats:italic> </jats:ext-link> </jats:named-content>. Therefore, the novel isolate represents a novel species, for which the name <jats:italic>Chryseobacterium camelliae</jats:italic> sp. nov. is proposed, with THG C4-1<jats:sup>T</jats:sup> ( = KACC 16985<jats:sup>T</jats:sup> = JCM 18745<jats:sup>T</jats:sup>) as the type strain.</jats:p> Chryseobacterium camelliae sp. nov., isolated from green tea International Journal of Systematic and Evolutionary Microbiology |
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Microbiology Society, 2014 |
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Microbiology Society |
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International Journal of Systematic and Evolutionary Microbiology |
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| title |
Chryseobacterium camelliae sp. nov., isolated from green tea |
| title_unstemmed |
Chryseobacterium camelliae sp. nov., isolated from green tea |
| title_full |
Chryseobacterium camelliae sp. nov., isolated from green tea |
| title_fullStr |
Chryseobacterium camelliae sp. nov., isolated from green tea |
| title_full_unstemmed |
Chryseobacterium camelliae sp. nov., isolated from green tea |
| title_short |
Chryseobacterium camelliae sp. nov., isolated from green tea |
| title_sort |
chryseobacterium camelliae sp. nov., isolated from green tea |
| topic |
General Medicine Ecology, Evolution, Behavior and Systematics Microbiology |
| url |
http://dx.doi.org/10.1099/ijs.0.057398-0 |
| publishDate |
2014 |
| physical |
851-857 |
| description |
<jats:p>A Gram-staining-negative, strictly aerobic, non-motile, rod-shaped and flexirubin-type-pigmented strain, THG C4-1<jats:sup>T</jats:sup>, was isolated from green tea leaves in Jangheung-gun, Republic of Korea. Strain THG C4-1<jats:sup>T</jats:sup> grew well at 20–30 °C, at pH 7.0–7.5 and in the absence of NaCl on nutrient agar. Based on 16S rRNA gene sequence comparisons, strain THG C4-1<jats:sup>T</jats:sup> was most closely related to <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple">
<jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.10254" xlink:type="simple">
<jats:italic>Chryseobacterium taiwanense</jats:italic>
</jats:ext-link>
</jats:named-content> Soil-3-27<jats:sup>T</jats:sup> (97.7 %), <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple">
<jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.20322" xlink:type="simple">
<jats:italic>C. hagamense</jats:italic>
</jats:ext-link>
</jats:named-content> RHA2-9<jats:sup>T</jats:sup> (97.2 %), <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple">
<jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.13275" xlink:type="simple">
<jats:italic>C. gregarium</jats:italic>
</jats:ext-link>
</jats:named-content> P 461/12<jats:sup>T</jats:sup> (97.2 %), <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple">
<jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.21849" xlink:type="simple">
<jats:italic>C. ginsenosidimutans</jats:italic>
</jats:ext-link>
</jats:named-content> THG 15<jats:sup>T</jats:sup> (97.1 %), <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple">
<jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.9911" xlink:type="simple">
<jats:italic>C. taeanense</jats:italic>
</jats:ext-link>
</jats:named-content> PHA3-4<jats:sup>T</jats:sup> (97.0 %) and <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple">
<jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.10660" xlink:type="simple">
<jats:italic>C. daeguense</jats:italic>
</jats:ext-link>
</jats:named-content> K105<jats:sup>T</jats:sup> (97.0 %), but DNA–DNA relatedness between strain THG C4-1<jats:sup>T</jats:sup> and its closest phylogenetic neighbours was below 21 %. The DNA G+C content was 41.7 mol%. The only isoprenoid quinone detected in strain THG C4-1<jats:sup>T</jats:sup> was menaquinone 6 (MK-6). The major component of the polyamine pattern was <jats:italic>sym</jats:italic>-homospermidine. The major polar lipids were phosphatidylethanolamine and unidentified aminolipids. The major fatty acids were iso-C<jats:sub>15 : 0</jats:sub>, iso-C<jats:sub>17 : 0</jats:sub> 3-OH and iso-C<jats:sub>17 : 1</jats:sub>ω9<jats:italic>c</jats:italic>. These data supported the affiliation of strain THG C4-1<jats:sup>T</jats:sup> to the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple">
<jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.8147" xlink:type="simple">
<jats:italic>Chryseobacterium</jats:italic>
</jats:ext-link>
</jats:named-content>. The results of physiological and biochemical tests enabled strain THG C4-1<jats:sup>T</jats:sup> to be differentiated genotypically and phenotypically from recognized species of the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple">
<jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.8147" xlink:type="simple">
<jats:italic>Chryseobacterium</jats:italic>
</jats:ext-link>
</jats:named-content>. Therefore, the novel isolate represents a novel species, for which the name <jats:italic>Chryseobacterium camelliae</jats:italic> sp. nov. is proposed, with THG C4-1<jats:sup>T</jats:sup> ( = KACC 16985<jats:sup>T</jats:sup> = JCM 18745<jats:sup>T</jats:sup>) as the type strain.</jats:p> |
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| description | <jats:p>A Gram-staining-negative, strictly aerobic, non-motile, rod-shaped and flexirubin-type-pigmented strain, THG C4-1<jats:sup>T</jats:sup>, was isolated from green tea leaves in Jangheung-gun, Republic of Korea. Strain THG C4-1<jats:sup>T</jats:sup> grew well at 20–30 °C, at pH 7.0–7.5 and in the absence of NaCl on nutrient agar. Based on 16S rRNA gene sequence comparisons, strain THG C4-1<jats:sup>T</jats:sup> was most closely related to <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.10254" xlink:type="simple"> <jats:italic>Chryseobacterium taiwanense</jats:italic> </jats:ext-link> </jats:named-content> Soil-3-27<jats:sup>T</jats:sup> (97.7 %), <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.20322" xlink:type="simple"> <jats:italic>C. hagamense</jats:italic> </jats:ext-link> </jats:named-content> RHA2-9<jats:sup>T</jats:sup> (97.2 %), <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.13275" xlink:type="simple"> <jats:italic>C. gregarium</jats:italic> </jats:ext-link> </jats:named-content> P 461/12<jats:sup>T</jats:sup> (97.2 %), <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.21849" xlink:type="simple"> <jats:italic>C. ginsenosidimutans</jats:italic> </jats:ext-link> </jats:named-content> THG 15<jats:sup>T</jats:sup> (97.1 %), <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.9911" xlink:type="simple"> <jats:italic>C. taeanense</jats:italic> </jats:ext-link> </jats:named-content> PHA3-4<jats:sup>T</jats:sup> (97.0 %) and <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.10660" xlink:type="simple"> <jats:italic>C. daeguense</jats:italic> </jats:ext-link> </jats:named-content> K105<jats:sup>T</jats:sup> (97.0 %), but DNA–DNA relatedness between strain THG C4-1<jats:sup>T</jats:sup> and its closest phylogenetic neighbours was below 21 %. The DNA G+C content was 41.7 mol%. The only isoprenoid quinone detected in strain THG C4-1<jats:sup>T</jats:sup> was menaquinone 6 (MK-6). The major component of the polyamine pattern was <jats:italic>sym</jats:italic>-homospermidine. The major polar lipids were phosphatidylethanolamine and unidentified aminolipids. The major fatty acids were iso-C<jats:sub>15 : 0</jats:sub>, iso-C<jats:sub>17 : 0</jats:sub> 3-OH and iso-C<jats:sub>17 : 1</jats:sub>ω9<jats:italic>c</jats:italic>. These data supported the affiliation of strain THG C4-1<jats:sup>T</jats:sup> to the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.8147" xlink:type="simple"> <jats:italic>Chryseobacterium</jats:italic> </jats:ext-link> </jats:named-content>. The results of physiological and biochemical tests enabled strain THG C4-1<jats:sup>T</jats:sup> to be differentiated genotypically and phenotypically from recognized species of the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.8147" xlink:type="simple"> <jats:italic>Chryseobacterium</jats:italic> </jats:ext-link> </jats:named-content>. Therefore, the novel isolate represents a novel species, for which the name <jats:italic>Chryseobacterium camelliae</jats:italic> sp. nov. is proposed, with THG C4-1<jats:sup>T</jats:sup> ( = KACC 16985<jats:sup>T</jats:sup> = JCM 18745<jats:sup>T</jats:sup>) as the type strain.</jats:p> |
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| series | International Journal of Systematic and Evolutionary Microbiology |
| source_id | 49 |
| spelling | Kook, MooChang Son, Heung-Min Ngo, Hien T. T. Yi, Tae-Hoo 1466-5026 1466-5034 Microbiology Society General Medicine Ecology, Evolution, Behavior and Systematics Microbiology http://dx.doi.org/10.1099/ijs.0.057398-0 <jats:p>A Gram-staining-negative, strictly aerobic, non-motile, rod-shaped and flexirubin-type-pigmented strain, THG C4-1<jats:sup>T</jats:sup>, was isolated from green tea leaves in Jangheung-gun, Republic of Korea. Strain THG C4-1<jats:sup>T</jats:sup> grew well at 20–30 °C, at pH 7.0–7.5 and in the absence of NaCl on nutrient agar. Based on 16S rRNA gene sequence comparisons, strain THG C4-1<jats:sup>T</jats:sup> was most closely related to <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.10254" xlink:type="simple"> <jats:italic>Chryseobacterium taiwanense</jats:italic> </jats:ext-link> </jats:named-content> Soil-3-27<jats:sup>T</jats:sup> (97.7 %), <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.20322" xlink:type="simple"> <jats:italic>C. hagamense</jats:italic> </jats:ext-link> </jats:named-content> RHA2-9<jats:sup>T</jats:sup> (97.2 %), <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.13275" xlink:type="simple"> <jats:italic>C. gregarium</jats:italic> </jats:ext-link> </jats:named-content> P 461/12<jats:sup>T</jats:sup> (97.2 %), <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.21849" xlink:type="simple"> <jats:italic>C. ginsenosidimutans</jats:italic> </jats:ext-link> </jats:named-content> THG 15<jats:sup>T</jats:sup> (97.1 %), <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.9911" xlink:type="simple"> <jats:italic>C. taeanense</jats:italic> </jats:ext-link> </jats:named-content> PHA3-4<jats:sup>T</jats:sup> (97.0 %) and <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.10660" xlink:type="simple"> <jats:italic>C. daeguense</jats:italic> </jats:ext-link> </jats:named-content> K105<jats:sup>T</jats:sup> (97.0 %), but DNA–DNA relatedness between strain THG C4-1<jats:sup>T</jats:sup> and its closest phylogenetic neighbours was below 21 %. The DNA G+C content was 41.7 mol%. The only isoprenoid quinone detected in strain THG C4-1<jats:sup>T</jats:sup> was menaquinone 6 (MK-6). The major component of the polyamine pattern was <jats:italic>sym</jats:italic>-homospermidine. The major polar lipids were phosphatidylethanolamine and unidentified aminolipids. The major fatty acids were iso-C<jats:sub>15 : 0</jats:sub>, iso-C<jats:sub>17 : 0</jats:sub> 3-OH and iso-C<jats:sub>17 : 1</jats:sub>ω9<jats:italic>c</jats:italic>. These data supported the affiliation of strain THG C4-1<jats:sup>T</jats:sup> to the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.8147" xlink:type="simple"> <jats:italic>Chryseobacterium</jats:italic> </jats:ext-link> </jats:named-content>. The results of physiological and biochemical tests enabled strain THG C4-1<jats:sup>T</jats:sup> to be differentiated genotypically and phenotypically from recognized species of the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.8147" xlink:type="simple"> <jats:italic>Chryseobacterium</jats:italic> </jats:ext-link> </jats:named-content>. Therefore, the novel isolate represents a novel species, for which the name <jats:italic>Chryseobacterium camelliae</jats:italic> sp. nov. is proposed, with THG C4-1<jats:sup>T</jats:sup> ( = KACC 16985<jats:sup>T</jats:sup> = JCM 18745<jats:sup>T</jats:sup>) as the type strain.</jats:p> Chryseobacterium camelliae sp. nov., isolated from green tea International Journal of Systematic and Evolutionary Microbiology |
| spellingShingle | Kook, MooChang, Son, Heung-Min, Ngo, Hien T. T., Yi, Tae-Hoo, International Journal of Systematic and Evolutionary Microbiology, Chryseobacterium camelliae sp. nov., isolated from green tea, General Medicine, Ecology, Evolution, Behavior and Systematics, Microbiology |
| title | Chryseobacterium camelliae sp. nov., isolated from green tea |
| title_full | Chryseobacterium camelliae sp. nov., isolated from green tea |
| title_fullStr | Chryseobacterium camelliae sp. nov., isolated from green tea |
| title_full_unstemmed | Chryseobacterium camelliae sp. nov., isolated from green tea |
| title_short | Chryseobacterium camelliae sp. nov., isolated from green tea |
| title_sort | chryseobacterium camelliae sp. nov., isolated from green tea |
| title_unstemmed | Chryseobacterium camelliae sp. nov., isolated from green tea |
| topic | General Medicine, Ecology, Evolution, Behavior and Systematics, Microbiology |
| url | http://dx.doi.org/10.1099/ijs.0.057398-0 |