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Microbacterium kyungheense sp. nov. and Microbacterium jejuense sp. nov., isolated from salty soil

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Zeitschriftentitel: International Journal of Systematic and Evolutionary Microbiology
Personen und Körperschaften: Kook, MooChang, Son, Heung-Min, Yi, Tae-Hoo
In: International Journal of Systematic and Evolutionary Microbiology, 64, 2014, Pt_7, S. 2267-2273
Format: E-Article
Sprache: Englisch
veröffentlicht:
Microbiology Society
Schlagwörter:
General Medicine
Ecology, Evolution, Behavior and Systematics
Microbiology
author_facet Kook, MooChang
Son, Heung-Min
Yi, Tae-Hoo
Kook, MooChang
Son, Heung-Min
Yi, Tae-Hoo
author Kook, MooChang
Son, Heung-Min
Yi, Tae-Hoo
spellingShingle Kook, MooChang
Son, Heung-Min
Yi, Tae-Hoo
International Journal of Systematic and Evolutionary Microbiology
Microbacterium kyungheense sp. nov. and Microbacterium jejuense sp. nov., isolated from salty soil
General Medicine
Ecology, Evolution, Behavior and Systematics
Microbiology
author_sort kook, moochang
spelling Kook, MooChang Son, Heung-Min Yi, Tae-Hoo 1466-5026 1466-5034 Microbiology Society General Medicine Ecology, Evolution, Behavior and Systematics Microbiology http://dx.doi.org/10.1099/ijs.0.054973-0 <jats:p>Two novel strains, THG-C26<jats:sup>T</jats:sup> and THG-C31<jats:sup>T</jats:sup>, were characterized using a polyphasic approach to determine their taxonomic positions. These two isolates were aerobic, Gram-stain-positive, non-motile, non-spore-forming and rod-shaped. 16S rRNA gene sequences and phenotypic features including chemotaxonomic characteristics indicated that the two isolates clearly represented members of the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.6034" xlink:type="simple"> <jats:italic>Microbacterium</jats:italic> </jats:ext-link> </jats:named-content>. The quinone systems of strains THG-C26<jats:sup>T</jats:sup> and THG-C31<jats:sup>T</jats:sup> contained MK-12/MK-13 as major menaquinones. The diamino acid in cell-wall hydrolysates of the two strains was ornithine. The major fatty acids were iso-C<jats:sub>16 : 0</jats:sub>, anteiso-C<jats:sub>15 : 0</jats:sub> and anteiso-C<jats:sub>17 : 0</jats:sub>. The polyamine pattern had spermidine as the predominant component. The major polar lipids were phosphatidylglycerol, diphosphatidylglycerol and unidentified glycolipids. Phenotypic characteristics supported the affiliation of strains THG-C26<jats:sup>T</jats:sup> and THG-C31<jats:sup>T</jats:sup> to the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.6034" xlink:type="simple"> <jats:italic>Microbacterium</jats:italic> </jats:ext-link> </jats:named-content>. Chemotaxonomic data and DNA–DNA relatedness values allowed differentiation of these strains from other species of the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.6034" xlink:type="simple"> <jats:italic>Microbacterium</jats:italic> </jats:ext-link> </jats:named-content> with validly published names. Strains THG-C26<jats:sup>T</jats:sup> and THG-C31<jats:sup>T</jats:sup> showed highest 16S rRNA gene sequence similarities with <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.6061" xlink:type="simple"> <jats:italic>Microbacterium resistens</jats:italic> </jats:ext-link> </jats:named-content> DMMZ 1710<jats:sup>T</jats:sup> (98.5 %) and <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.6068" xlink:type="simple"> <jats:italic>Microbacterium trichothecenolyticum</jats:italic> </jats:ext-link> </jats:named-content> IFO 15077<jats:sup>T</jats:sup> (98.8 %), respectively, and the 16S rRNA gene sequence similarity between them was 99.0 %. DNA–DNA hybridization values between the novel isolates and strains of other species of the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.6034" xlink:type="simple"> <jats:italic>Microbacterium</jats:italic> </jats:ext-link> </jats:named-content> with validly published names were 4–25 %. Therefore, strains THG-C26<jats:sup>T</jats:sup> and THG-C31<jats:sup>T</jats:sup> are considered to represent two novel species of the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.6034" xlink:type="simple"> <jats:italic>Microbacterium</jats:italic> </jats:ext-link> </jats:named-content>, for which the names <jats:italic>Microbacterium kyungheense</jats:italic> sp. nov. [type strain THG-C26<jats:sup>T</jats:sup> ( = KACC 17124<jats:sup>T</jats:sup> = JCM 18735<jats:sup>T</jats:sup>)] and <jats:italic>Microbacterium jejuense</jats:italic> sp. nov. [type strain THG-C31<jats:sup>T</jats:sup> ( = KACC 17123<jats:sup>T</jats:sup> = JCM 18734<jats:sup>T</jats:sup>)] are proposed.</jats:p> Microbacterium kyungheense sp. nov. and Microbacterium jejuense sp. nov., isolated from salty soil International Journal of Systematic and Evolutionary Microbiology
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series International Journal of Systematic and Evolutionary Microbiology
source_id 49
title Microbacterium kyungheense sp. nov. and Microbacterium jejuense sp. nov., isolated from salty soil
title_unstemmed Microbacterium kyungheense sp. nov. and Microbacterium jejuense sp. nov., isolated from salty soil
title_full Microbacterium kyungheense sp. nov. and Microbacterium jejuense sp. nov., isolated from salty soil
title_fullStr Microbacterium kyungheense sp. nov. and Microbacterium jejuense sp. nov., isolated from salty soil
title_full_unstemmed Microbacterium kyungheense sp. nov. and Microbacterium jejuense sp. nov., isolated from salty soil
title_short Microbacterium kyungheense sp. nov. and Microbacterium jejuense sp. nov., isolated from salty soil
title_sort microbacterium kyungheense sp. nov. and microbacterium jejuense sp. nov., isolated from salty soil
topic General Medicine
Ecology, Evolution, Behavior and Systematics
Microbiology
url http://dx.doi.org/10.1099/ijs.0.054973-0
publishDate 2014
physical 2267-2273
description <jats:p>Two novel strains, THG-C26<jats:sup>T</jats:sup> and THG-C31<jats:sup>T</jats:sup>, were characterized using a polyphasic approach to determine their taxonomic positions. These two isolates were aerobic, Gram-stain-positive, non-motile, non-spore-forming and rod-shaped. 16S rRNA gene sequences and phenotypic features including chemotaxonomic characteristics indicated that the two isolates clearly represented members of the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.6034" xlink:type="simple"> <jats:italic>Microbacterium</jats:italic> </jats:ext-link> </jats:named-content>. The quinone systems of strains THG-C26<jats:sup>T</jats:sup> and THG-C31<jats:sup>T</jats:sup> contained MK-12/MK-13 as major menaquinones. The diamino acid in cell-wall hydrolysates of the two strains was ornithine. The major fatty acids were iso-C<jats:sub>16 : 0</jats:sub>, anteiso-C<jats:sub>15 : 0</jats:sub> and anteiso-C<jats:sub>17 : 0</jats:sub>. The polyamine pattern had spermidine as the predominant component. The major polar lipids were phosphatidylglycerol, diphosphatidylglycerol and unidentified glycolipids. Phenotypic characteristics supported the affiliation of strains THG-C26<jats:sup>T</jats:sup> and THG-C31<jats:sup>T</jats:sup> to the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.6034" xlink:type="simple"> <jats:italic>Microbacterium</jats:italic> </jats:ext-link> </jats:named-content>. Chemotaxonomic data and DNA–DNA relatedness values allowed differentiation of these strains from other species of the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.6034" xlink:type="simple"> <jats:italic>Microbacterium</jats:italic> </jats:ext-link> </jats:named-content> with validly published names. Strains THG-C26<jats:sup>T</jats:sup> and THG-C31<jats:sup>T</jats:sup> showed highest 16S rRNA gene sequence similarities with <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.6061" xlink:type="simple"> <jats:italic>Microbacterium resistens</jats:italic> </jats:ext-link> </jats:named-content> DMMZ 1710<jats:sup>T</jats:sup> (98.5 %) and <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.6068" xlink:type="simple"> <jats:italic>Microbacterium trichothecenolyticum</jats:italic> </jats:ext-link> </jats:named-content> IFO 15077<jats:sup>T</jats:sup> (98.8 %), respectively, and the 16S rRNA gene sequence similarity between them was 99.0 %. DNA–DNA hybridization values between the novel isolates and strains of other species of the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.6034" xlink:type="simple"> <jats:italic>Microbacterium</jats:italic> </jats:ext-link> </jats:named-content> with validly published names were 4–25 %. Therefore, strains THG-C26<jats:sup>T</jats:sup> and THG-C31<jats:sup>T</jats:sup> are considered to represent two novel species of the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.6034" xlink:type="simple"> <jats:italic>Microbacterium</jats:italic> </jats:ext-link> </jats:named-content>, for which the names <jats:italic>Microbacterium kyungheense</jats:italic> sp. nov. [type strain THG-C26<jats:sup>T</jats:sup> ( = KACC 17124<jats:sup>T</jats:sup> = JCM 18735<jats:sup>T</jats:sup>)] and <jats:italic>Microbacterium jejuense</jats:italic> sp. nov. [type strain THG-C31<jats:sup>T</jats:sup> ( = KACC 17123<jats:sup>T</jats:sup> = JCM 18734<jats:sup>T</jats:sup>)] are proposed.</jats:p>
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author Kook, MooChang, Son, Heung-Min, Yi, Tae-Hoo
author_facet Kook, MooChang, Son, Heung-Min, Yi, Tae-Hoo, Kook, MooChang, Son, Heung-Min, Yi, Tae-Hoo
author_sort kook, moochang
container_issue Pt_7
container_start_page 2267
container_title International Journal of Systematic and Evolutionary Microbiology
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description <jats:p>Two novel strains, THG-C26<jats:sup>T</jats:sup> and THG-C31<jats:sup>T</jats:sup>, were characterized using a polyphasic approach to determine their taxonomic positions. These two isolates were aerobic, Gram-stain-positive, non-motile, non-spore-forming and rod-shaped. 16S rRNA gene sequences and phenotypic features including chemotaxonomic characteristics indicated that the two isolates clearly represented members of the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.6034" xlink:type="simple"> <jats:italic>Microbacterium</jats:italic> </jats:ext-link> </jats:named-content>. The quinone systems of strains THG-C26<jats:sup>T</jats:sup> and THG-C31<jats:sup>T</jats:sup> contained MK-12/MK-13 as major menaquinones. The diamino acid in cell-wall hydrolysates of the two strains was ornithine. The major fatty acids were iso-C<jats:sub>16 : 0</jats:sub>, anteiso-C<jats:sub>15 : 0</jats:sub> and anteiso-C<jats:sub>17 : 0</jats:sub>. The polyamine pattern had spermidine as the predominant component. The major polar lipids were phosphatidylglycerol, diphosphatidylglycerol and unidentified glycolipids. Phenotypic characteristics supported the affiliation of strains THG-C26<jats:sup>T</jats:sup> and THG-C31<jats:sup>T</jats:sup> to the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.6034" xlink:type="simple"> <jats:italic>Microbacterium</jats:italic> </jats:ext-link> </jats:named-content>. Chemotaxonomic data and DNA–DNA relatedness values allowed differentiation of these strains from other species of the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.6034" xlink:type="simple"> <jats:italic>Microbacterium</jats:italic> </jats:ext-link> </jats:named-content> with validly published names. Strains THG-C26<jats:sup>T</jats:sup> and THG-C31<jats:sup>T</jats:sup> showed highest 16S rRNA gene sequence similarities with <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.6061" xlink:type="simple"> <jats:italic>Microbacterium resistens</jats:italic> </jats:ext-link> </jats:named-content> DMMZ 1710<jats:sup>T</jats:sup> (98.5 %) and <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.6068" xlink:type="simple"> <jats:italic>Microbacterium trichothecenolyticum</jats:italic> </jats:ext-link> </jats:named-content> IFO 15077<jats:sup>T</jats:sup> (98.8 %), respectively, and the 16S rRNA gene sequence similarity between them was 99.0 %. DNA–DNA hybridization values between the novel isolates and strains of other species of the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.6034" xlink:type="simple"> <jats:italic>Microbacterium</jats:italic> </jats:ext-link> </jats:named-content> with validly published names were 4–25 %. Therefore, strains THG-C26<jats:sup>T</jats:sup> and THG-C31<jats:sup>T</jats:sup> are considered to represent two novel species of the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.6034" xlink:type="simple"> <jats:italic>Microbacterium</jats:italic> </jats:ext-link> </jats:named-content>, for which the names <jats:italic>Microbacterium kyungheense</jats:italic> sp. nov. [type strain THG-C26<jats:sup>T</jats:sup> ( = KACC 17124<jats:sup>T</jats:sup> = JCM 18735<jats:sup>T</jats:sup>)] and <jats:italic>Microbacterium jejuense</jats:italic> sp. nov. [type strain THG-C31<jats:sup>T</jats:sup> ( = KACC 17123<jats:sup>T</jats:sup> = JCM 18734<jats:sup>T</jats:sup>)] are proposed.</jats:p>
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series International Journal of Systematic and Evolutionary Microbiology
source_id 49
spelling Kook, MooChang Son, Heung-Min Yi, Tae-Hoo 1466-5026 1466-5034 Microbiology Society General Medicine Ecology, Evolution, Behavior and Systematics Microbiology http://dx.doi.org/10.1099/ijs.0.054973-0 <jats:p>Two novel strains, THG-C26<jats:sup>T</jats:sup> and THG-C31<jats:sup>T</jats:sup>, were characterized using a polyphasic approach to determine their taxonomic positions. These two isolates were aerobic, Gram-stain-positive, non-motile, non-spore-forming and rod-shaped. 16S rRNA gene sequences and phenotypic features including chemotaxonomic characteristics indicated that the two isolates clearly represented members of the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.6034" xlink:type="simple"> <jats:italic>Microbacterium</jats:italic> </jats:ext-link> </jats:named-content>. The quinone systems of strains THG-C26<jats:sup>T</jats:sup> and THG-C31<jats:sup>T</jats:sup> contained MK-12/MK-13 as major menaquinones. The diamino acid in cell-wall hydrolysates of the two strains was ornithine. The major fatty acids were iso-C<jats:sub>16 : 0</jats:sub>, anteiso-C<jats:sub>15 : 0</jats:sub> and anteiso-C<jats:sub>17 : 0</jats:sub>. The polyamine pattern had spermidine as the predominant component. The major polar lipids were phosphatidylglycerol, diphosphatidylglycerol and unidentified glycolipids. Phenotypic characteristics supported the affiliation of strains THG-C26<jats:sup>T</jats:sup> and THG-C31<jats:sup>T</jats:sup> to the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.6034" xlink:type="simple"> <jats:italic>Microbacterium</jats:italic> </jats:ext-link> </jats:named-content>. Chemotaxonomic data and DNA–DNA relatedness values allowed differentiation of these strains from other species of the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.6034" xlink:type="simple"> <jats:italic>Microbacterium</jats:italic> </jats:ext-link> </jats:named-content> with validly published names. Strains THG-C26<jats:sup>T</jats:sup> and THG-C31<jats:sup>T</jats:sup> showed highest 16S rRNA gene sequence similarities with <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.6061" xlink:type="simple"> <jats:italic>Microbacterium resistens</jats:italic> </jats:ext-link> </jats:named-content> DMMZ 1710<jats:sup>T</jats:sup> (98.5 %) and <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.6068" xlink:type="simple"> <jats:italic>Microbacterium trichothecenolyticum</jats:italic> </jats:ext-link> </jats:named-content> IFO 15077<jats:sup>T</jats:sup> (98.8 %), respectively, and the 16S rRNA gene sequence similarity between them was 99.0 %. DNA–DNA hybridization values between the novel isolates and strains of other species of the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.6034" xlink:type="simple"> <jats:italic>Microbacterium</jats:italic> </jats:ext-link> </jats:named-content> with validly published names were 4–25 %. Therefore, strains THG-C26<jats:sup>T</jats:sup> and THG-C31<jats:sup>T</jats:sup> are considered to represent two novel species of the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.6034" xlink:type="simple"> <jats:italic>Microbacterium</jats:italic> </jats:ext-link> </jats:named-content>, for which the names <jats:italic>Microbacterium kyungheense</jats:italic> sp. nov. [type strain THG-C26<jats:sup>T</jats:sup> ( = KACC 17124<jats:sup>T</jats:sup> = JCM 18735<jats:sup>T</jats:sup>)] and <jats:italic>Microbacterium jejuense</jats:italic> sp. nov. [type strain THG-C31<jats:sup>T</jats:sup> ( = KACC 17123<jats:sup>T</jats:sup> = JCM 18734<jats:sup>T</jats:sup>)] are proposed.</jats:p> Microbacterium kyungheense sp. nov. and Microbacterium jejuense sp. nov., isolated from salty soil International Journal of Systematic and Evolutionary Microbiology
spellingShingle Kook, MooChang, Son, Heung-Min, Yi, Tae-Hoo, International Journal of Systematic and Evolutionary Microbiology, Microbacterium kyungheense sp. nov. and Microbacterium jejuense sp. nov., isolated from salty soil, General Medicine, Ecology, Evolution, Behavior and Systematics, Microbiology
title Microbacterium kyungheense sp. nov. and Microbacterium jejuense sp. nov., isolated from salty soil
title_full Microbacterium kyungheense sp. nov. and Microbacterium jejuense sp. nov., isolated from salty soil
title_fullStr Microbacterium kyungheense sp. nov. and Microbacterium jejuense sp. nov., isolated from salty soil
title_full_unstemmed Microbacterium kyungheense sp. nov. and Microbacterium jejuense sp. nov., isolated from salty soil
title_short Microbacterium kyungheense sp. nov. and Microbacterium jejuense sp. nov., isolated from salty soil
title_sort microbacterium kyungheense sp. nov. and microbacterium jejuense sp. nov., isolated from salty soil
title_unstemmed Microbacterium kyungheense sp. nov. and Microbacterium jejuense sp. nov., isolated from salty soil
topic General Medicine, Ecology, Evolution, Behavior and Systematics, Microbiology
url http://dx.doi.org/10.1099/ijs.0.054973-0