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Microbispora hainanensis sp. nov., isolated from rhizosphere soil of Excoecaria agallocha in a mangrove
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| Zeitschriftentitel: | International Journal of Systematic and Evolutionary Microbiology |
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| Personen und Körperschaften: | , , , , , , , |
| In: | International Journal of Systematic and Evolutionary Microbiology, 62, 2012, Pt_10, S. 2430-2434 |
| Format: | E-Article |
| Sprache: | Englisch |
| veröffentlicht: |
Microbiology Society
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| author_facet |
Xu, Xiao-Xiong Wang, Hai-Long Lin, Hai-Peng Wang, Cheng Qu, Zhi Xie, Qing-Yi Ruan, Ji-Sheng Hong, Kui Xu, Xiao-Xiong Wang, Hai-Long Lin, Hai-Peng Wang, Cheng Qu, Zhi Xie, Qing-Yi Ruan, Ji-Sheng Hong, Kui |
|---|---|
| author |
Xu, Xiao-Xiong Wang, Hai-Long Lin, Hai-Peng Wang, Cheng Qu, Zhi Xie, Qing-Yi Ruan, Ji-Sheng Hong, Kui |
| spellingShingle |
Xu, Xiao-Xiong Wang, Hai-Long Lin, Hai-Peng Wang, Cheng Qu, Zhi Xie, Qing-Yi Ruan, Ji-Sheng Hong, Kui International Journal of Systematic and Evolutionary Microbiology Microbispora hainanensis sp. nov., isolated from rhizosphere soil of Excoecaria agallocha in a mangrove General Medicine Ecology, Evolution, Behavior and Systematics Microbiology |
| author_sort |
xu, xiao-xiong |
| spelling |
Xu, Xiao-Xiong Wang, Hai-Long Lin, Hai-Peng Wang, Cheng Qu, Zhi Xie, Qing-Yi Ruan, Ji-Sheng Hong, Kui 1466-5026 1466-5034 Microbiology Society General Medicine Ecology, Evolution, Behavior and Systematics Microbiology http://dx.doi.org/10.1099/ijs.0.037267-0 <jats:p>Strain 211020<jats:sup>T</jats:sup> was isolated from rhizosphere soil of <jats:italic>Excoecaria agallocha</jats:italic> in a mangrove in Hainan, China. The strain produced longitudinal pair spores branching from aerial hyphae. 16S rRNA gene sequence analysis showed that the isolate belonged to the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.7454" xlink:type="simple"> <jats:italic>Microbispora</jats:italic> </jats:ext-link> </jats:named-content>, exhibiting the highest 16S rRNA gene sequence similarity (98.75 %) to <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.7461" xlink:type="simple"> <jats:italic>Microbispora corallina</jats:italic> </jats:ext-link> </jats:named-content> JCM 10267<jats:sup>T</jats:sup> with a low DNA–DNA relatedness value (13±0.6 %). The isolate contained <jats:italic>meso</jats:italic>-diaminopimelic acid as the diagnostic diamino acid but madurose was not detected. The predominant menaquinones were MK-9(H<jats:sub>4</jats:sub>), MK-9(H<jats:sub>2</jats:sub>) and MK-9(H<jats:sub>0</jats:sub>), and the major fatty acids were iso-C<jats:sub>16 : 0</jats:sub>, iso-C<jats:sub>15 : 0</jats:sub> and C<jats:sub>17 : 0</jats:sub>. The phospholipid profile of strain 211020<jats:sup>T</jats:sup> comprised phosphatidylinositol mannoside, phosphatidylethanolamine, diphosphatidylglycerol and phospholipids of unknown structure containing glucosamine. The DNA G+C content was 70.8 mol%. On the basis of phenotypic and genotypic data, strain 211020<jats:sup>T</jats:sup> can be distinguished as a novel species of the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.7454" xlink:type="simple"> <jats:italic>Microbispora</jats:italic> </jats:ext-link> </jats:named-content>, for which the name <jats:italic>Microbispora hainanensis</jats:italic> sp. nov., is proposed. The type strain is 211020<jats:sup>T</jats:sup> ( = CGMCC 4.5595<jats:sup>T</jats:sup> = DSM 45428<jats:sup>T</jats:sup>).</jats:p> Microbispora hainanensis sp. nov., isolated from rhizosphere soil of Excoecaria agallocha in a mangrove International Journal of Systematic and Evolutionary Microbiology |
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2012 |
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Microbiology Society |
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International Journal of Systematic and Evolutionary Microbiology |
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| title |
Microbispora hainanensis sp. nov., isolated from rhizosphere soil of Excoecaria agallocha in a mangrove |
| title_unstemmed |
Microbispora hainanensis sp. nov., isolated from rhizosphere soil of Excoecaria agallocha in a mangrove |
| title_full |
Microbispora hainanensis sp. nov., isolated from rhizosphere soil of Excoecaria agallocha in a mangrove |
| title_fullStr |
Microbispora hainanensis sp. nov., isolated from rhizosphere soil of Excoecaria agallocha in a mangrove |
| title_full_unstemmed |
Microbispora hainanensis sp. nov., isolated from rhizosphere soil of Excoecaria agallocha in a mangrove |
| title_short |
Microbispora hainanensis sp. nov., isolated from rhizosphere soil of Excoecaria agallocha in a mangrove |
| title_sort |
microbispora hainanensis sp. nov., isolated from rhizosphere soil of excoecaria agallocha in a mangrove |
| topic |
General Medicine Ecology, Evolution, Behavior and Systematics Microbiology |
| url |
http://dx.doi.org/10.1099/ijs.0.037267-0 |
| publishDate |
2012 |
| physical |
2430-2434 |
| description |
<jats:p>Strain 211020<jats:sup>T</jats:sup> was isolated from rhizosphere soil of <jats:italic>Excoecaria agallocha</jats:italic> in a mangrove in Hainan, China. The strain produced longitudinal pair spores branching from aerial hyphae. 16S rRNA gene sequence analysis showed that the isolate belonged to the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple">
<jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.7454" xlink:type="simple">
<jats:italic>Microbispora</jats:italic>
</jats:ext-link>
</jats:named-content>, exhibiting the highest 16S rRNA gene sequence similarity (98.75 %) to <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple">
<jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.7461" xlink:type="simple">
<jats:italic>Microbispora corallina</jats:italic>
</jats:ext-link>
</jats:named-content> JCM 10267<jats:sup>T</jats:sup> with a low DNA–DNA relatedness value (13±0.6 %). The isolate contained <jats:italic>meso</jats:italic>-diaminopimelic acid as the diagnostic diamino acid but madurose was not detected. The predominant menaquinones were MK-9(H<jats:sub>4</jats:sub>), MK-9(H<jats:sub>2</jats:sub>) and MK-9(H<jats:sub>0</jats:sub>), and the major fatty acids were iso-C<jats:sub>16 : 0</jats:sub>, iso-C<jats:sub>15 : 0</jats:sub> and C<jats:sub>17 : 0</jats:sub>. The phospholipid profile of strain 211020<jats:sup>T</jats:sup> comprised phosphatidylinositol mannoside, phosphatidylethanolamine, diphosphatidylglycerol and phospholipids of unknown structure containing glucosamine. The DNA G+C content was 70.8 mol%. On the basis of phenotypic and genotypic data, strain 211020<jats:sup>T</jats:sup> can be distinguished as a novel species of the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple">
<jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.7454" xlink:type="simple">
<jats:italic>Microbispora</jats:italic>
</jats:ext-link>
</jats:named-content>, for which the name <jats:italic>Microbispora hainanensis</jats:italic> sp. nov., is proposed. The type strain is 211020<jats:sup>T</jats:sup> ( = CGMCC 4.5595<jats:sup>T</jats:sup> = DSM 45428<jats:sup>T</jats:sup>).</jats:p> |
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| description | <jats:p>Strain 211020<jats:sup>T</jats:sup> was isolated from rhizosphere soil of <jats:italic>Excoecaria agallocha</jats:italic> in a mangrove in Hainan, China. The strain produced longitudinal pair spores branching from aerial hyphae. 16S rRNA gene sequence analysis showed that the isolate belonged to the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.7454" xlink:type="simple"> <jats:italic>Microbispora</jats:italic> </jats:ext-link> </jats:named-content>, exhibiting the highest 16S rRNA gene sequence similarity (98.75 %) to <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.7461" xlink:type="simple"> <jats:italic>Microbispora corallina</jats:italic> </jats:ext-link> </jats:named-content> JCM 10267<jats:sup>T</jats:sup> with a low DNA–DNA relatedness value (13±0.6 %). The isolate contained <jats:italic>meso</jats:italic>-diaminopimelic acid as the diagnostic diamino acid but madurose was not detected. The predominant menaquinones were MK-9(H<jats:sub>4</jats:sub>), MK-9(H<jats:sub>2</jats:sub>) and MK-9(H<jats:sub>0</jats:sub>), and the major fatty acids were iso-C<jats:sub>16 : 0</jats:sub>, iso-C<jats:sub>15 : 0</jats:sub> and C<jats:sub>17 : 0</jats:sub>. The phospholipid profile of strain 211020<jats:sup>T</jats:sup> comprised phosphatidylinositol mannoside, phosphatidylethanolamine, diphosphatidylglycerol and phospholipids of unknown structure containing glucosamine. The DNA G+C content was 70.8 mol%. On the basis of phenotypic and genotypic data, strain 211020<jats:sup>T</jats:sup> can be distinguished as a novel species of the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.7454" xlink:type="simple"> <jats:italic>Microbispora</jats:italic> </jats:ext-link> </jats:named-content>, for which the name <jats:italic>Microbispora hainanensis</jats:italic> sp. nov., is proposed. The type strain is 211020<jats:sup>T</jats:sup> ( = CGMCC 4.5595<jats:sup>T</jats:sup> = DSM 45428<jats:sup>T</jats:sup>).</jats:p> |
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| spelling | Xu, Xiao-Xiong Wang, Hai-Long Lin, Hai-Peng Wang, Cheng Qu, Zhi Xie, Qing-Yi Ruan, Ji-Sheng Hong, Kui 1466-5026 1466-5034 Microbiology Society General Medicine Ecology, Evolution, Behavior and Systematics Microbiology http://dx.doi.org/10.1099/ijs.0.037267-0 <jats:p>Strain 211020<jats:sup>T</jats:sup> was isolated from rhizosphere soil of <jats:italic>Excoecaria agallocha</jats:italic> in a mangrove in Hainan, China. The strain produced longitudinal pair spores branching from aerial hyphae. 16S rRNA gene sequence analysis showed that the isolate belonged to the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.7454" xlink:type="simple"> <jats:italic>Microbispora</jats:italic> </jats:ext-link> </jats:named-content>, exhibiting the highest 16S rRNA gene sequence similarity (98.75 %) to <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="species" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.7461" xlink:type="simple"> <jats:italic>Microbispora corallina</jats:italic> </jats:ext-link> </jats:named-content> JCM 10267<jats:sup>T</jats:sup> with a low DNA–DNA relatedness value (13±0.6 %). The isolate contained <jats:italic>meso</jats:italic>-diaminopimelic acid as the diagnostic diamino acid but madurose was not detected. The predominant menaquinones were MK-9(H<jats:sub>4</jats:sub>), MK-9(H<jats:sub>2</jats:sub>) and MK-9(H<jats:sub>0</jats:sub>), and the major fatty acids were iso-C<jats:sub>16 : 0</jats:sub>, iso-C<jats:sub>15 : 0</jats:sub> and C<jats:sub>17 : 0</jats:sub>. The phospholipid profile of strain 211020<jats:sup>T</jats:sup> comprised phosphatidylinositol mannoside, phosphatidylethanolamine, diphosphatidylglycerol and phospholipids of unknown structure containing glucosamine. The DNA G+C content was 70.8 mol%. On the basis of phenotypic and genotypic data, strain 211020<jats:sup>T</jats:sup> can be distinguished as a novel species of the genus <jats:named-content xmlns:xlink="http://www.w3.org/1999/xlink" content-type="genus" xlink:type="simple"> <jats:ext-link ext-link-type="uri" xlink:href="http://dx.doi.org/10.1601/nm.7454" xlink:type="simple"> <jats:italic>Microbispora</jats:italic> </jats:ext-link> </jats:named-content>, for which the name <jats:italic>Microbispora hainanensis</jats:italic> sp. nov., is proposed. The type strain is 211020<jats:sup>T</jats:sup> ( = CGMCC 4.5595<jats:sup>T</jats:sup> = DSM 45428<jats:sup>T</jats:sup>).</jats:p> Microbispora hainanensis sp. nov., isolated from rhizosphere soil of Excoecaria agallocha in a mangrove International Journal of Systematic and Evolutionary Microbiology |
| spellingShingle | Xu, Xiao-Xiong, Wang, Hai-Long, Lin, Hai-Peng, Wang, Cheng, Qu, Zhi, Xie, Qing-Yi, Ruan, Ji-Sheng, Hong, Kui, International Journal of Systematic and Evolutionary Microbiology, Microbispora hainanensis sp. nov., isolated from rhizosphere soil of Excoecaria agallocha in a mangrove, General Medicine, Ecology, Evolution, Behavior and Systematics, Microbiology |
| title | Microbispora hainanensis sp. nov., isolated from rhizosphere soil of Excoecaria agallocha in a mangrove |
| title_full | Microbispora hainanensis sp. nov., isolated from rhizosphere soil of Excoecaria agallocha in a mangrove |
| title_fullStr | Microbispora hainanensis sp. nov., isolated from rhizosphere soil of Excoecaria agallocha in a mangrove |
| title_full_unstemmed | Microbispora hainanensis sp. nov., isolated from rhizosphere soil of Excoecaria agallocha in a mangrove |
| title_short | Microbispora hainanensis sp. nov., isolated from rhizosphere soil of Excoecaria agallocha in a mangrove |
| title_sort | microbispora hainanensis sp. nov., isolated from rhizosphere soil of excoecaria agallocha in a mangrove |
| title_unstemmed | Microbispora hainanensis sp. nov., isolated from rhizosphere soil of Excoecaria agallocha in a mangrove |
| topic | General Medicine, Ecology, Evolution, Behavior and Systematics, Microbiology |
| url | http://dx.doi.org/10.1099/ijs.0.037267-0 |