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Ensembl 2020
Gespeichert in:
| Zeitschriftentitel: | Nucleic Acids Research |
|---|---|
| Personen und Körperschaften: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
| In: | Nucleic Acids Research, 2019 |
| Format: | E-Article |
| Sprache: | Englisch |
| veröffentlicht: |
Oxford University Press (OUP)
|
| Schlagwörter: |
| author_facet |
Yates, Andrew D Achuthan, Premanand Akanni, Wasiu Allen, James Allen, Jamie Alvarez-Jarreta, Jorge Amode, M Ridwan Armean, Irina M Azov, Andrey G Bennett, Ruth Bhai, Jyothish Billis, Konstantinos Boddu, Sanjay Marugán, José Carlos Cummins, Carla Davidson, Claire Dodiya, Kamalkumar Fatima, Reham Gall, Astrid Giron, Carlos Garcia Gil, Laurent Grego, Tiago Haggerty, Leanne Haskell, Erin Hourlier, Thibaut Izuogu, Osagie G Janacek, Sophie H Juettemann, Thomas Kay, Mike Lavidas, Ilias Le, Tuan Lemos, Diana Martinez, Jose Gonzalez Maurel, Thomas McDowall, Mark McMahon, Aoife Mohanan, Shamika Moore, Benjamin Nuhn, Michael Oheh, Denye N Parker, Anne Parton, Andrew Patricio, Mateus Sakthivel, Manoj Pandian Abdul Salam, Ahamed Imran Schmitt, Bianca M Schuilenburg, Helen Sheppard, Dan Sycheva, Mira Szuba, Marek Taylor, Kieron Thormann, Anja Threadgold, Glen Vullo, Alessandro Walts, Brandon Winterbottom, Andrea Zadissa, Amonida Chakiachvili, Marc Flint, Bethany Frankish, Adam Hunt, Sarah E IIsley, Garth Kostadima, Myrto Langridge, Nick Loveland, Jane E Martin, Fergal J Morales, Joannella Mudge, Jonathan M Muffato, Matthieu Perry, Emily Ruffier, Magali Trevanion, Stephen J Cunningham, Fiona Howe, Kevin L Zerbino, Daniel R Flicek, Paul Yates, Andrew D Achuthan, Premanand Akanni, Wasiu Allen, James Allen, Jamie Alvarez-Jarreta, Jorge Amode, M Ridwan Armean, Irina M Azov, Andrey G Bennett, Ruth Bhai, Jyothish Billis, Konstantinos Boddu, Sanjay Marugán, José Carlos Cummins, Carla Davidson, Claire Dodiya, Kamalkumar Fatima, Reham Gall, Astrid Giron, Carlos Garcia Gil, Laurent Grego, Tiago Haggerty, Leanne Haskell, Erin Hourlier, Thibaut Izuogu, Osagie G Janacek, Sophie H Juettemann, Thomas Kay, Mike Lavidas, Ilias Le, Tuan Lemos, Diana Martinez, Jose Gonzalez Maurel, Thomas McDowall, Mark McMahon, Aoife Mohanan, Shamika Moore, Benjamin Nuhn, Michael Oheh, Denye N Parker, Anne Parton, Andrew Patricio, Mateus Sakthivel, Manoj Pandian Abdul Salam, Ahamed Imran Schmitt, Bianca M Schuilenburg, Helen Sheppard, Dan Sycheva, Mira Szuba, Marek Taylor, Kieron Thormann, Anja Threadgold, Glen Vullo, Alessandro Walts, Brandon Winterbottom, Andrea Zadissa, Amonida Chakiachvili, Marc Flint, Bethany Frankish, Adam Hunt, Sarah E IIsley, Garth Kostadima, Myrto Langridge, Nick Loveland, Jane E Martin, Fergal J Morales, Joannella Mudge, Jonathan M Muffato, Matthieu Perry, Emily Ruffier, Magali Trevanion, Stephen J Cunningham, Fiona Howe, Kevin L Zerbino, Daniel R Flicek, Paul |
|---|---|
| author |
Yates, Andrew D Achuthan, Premanand Akanni, Wasiu Allen, James Allen, Jamie Alvarez-Jarreta, Jorge Amode, M Ridwan Armean, Irina M Azov, Andrey G Bennett, Ruth Bhai, Jyothish Billis, Konstantinos Boddu, Sanjay Marugán, José Carlos Cummins, Carla Davidson, Claire Dodiya, Kamalkumar Fatima, Reham Gall, Astrid Giron, Carlos Garcia Gil, Laurent Grego, Tiago Haggerty, Leanne Haskell, Erin Hourlier, Thibaut Izuogu, Osagie G Janacek, Sophie H Juettemann, Thomas Kay, Mike Lavidas, Ilias Le, Tuan Lemos, Diana Martinez, Jose Gonzalez Maurel, Thomas McDowall, Mark McMahon, Aoife Mohanan, Shamika Moore, Benjamin Nuhn, Michael Oheh, Denye N Parker, Anne Parton, Andrew Patricio, Mateus Sakthivel, Manoj Pandian Abdul Salam, Ahamed Imran Schmitt, Bianca M Schuilenburg, Helen Sheppard, Dan Sycheva, Mira Szuba, Marek Taylor, Kieron Thormann, Anja Threadgold, Glen Vullo, Alessandro Walts, Brandon Winterbottom, Andrea Zadissa, Amonida Chakiachvili, Marc Flint, Bethany Frankish, Adam Hunt, Sarah E IIsley, Garth Kostadima, Myrto Langridge, Nick Loveland, Jane E Martin, Fergal J Morales, Joannella Mudge, Jonathan M Muffato, Matthieu Perry, Emily Ruffier, Magali Trevanion, Stephen J Cunningham, Fiona Howe, Kevin L Zerbino, Daniel R Flicek, Paul |
| spellingShingle |
Yates, Andrew D Achuthan, Premanand Akanni, Wasiu Allen, James Allen, Jamie Alvarez-Jarreta, Jorge Amode, M Ridwan Armean, Irina M Azov, Andrey G Bennett, Ruth Bhai, Jyothish Billis, Konstantinos Boddu, Sanjay Marugán, José Carlos Cummins, Carla Davidson, Claire Dodiya, Kamalkumar Fatima, Reham Gall, Astrid Giron, Carlos Garcia Gil, Laurent Grego, Tiago Haggerty, Leanne Haskell, Erin Hourlier, Thibaut Izuogu, Osagie G Janacek, Sophie H Juettemann, Thomas Kay, Mike Lavidas, Ilias Le, Tuan Lemos, Diana Martinez, Jose Gonzalez Maurel, Thomas McDowall, Mark McMahon, Aoife Mohanan, Shamika Moore, Benjamin Nuhn, Michael Oheh, Denye N Parker, Anne Parton, Andrew Patricio, Mateus Sakthivel, Manoj Pandian Abdul Salam, Ahamed Imran Schmitt, Bianca M Schuilenburg, Helen Sheppard, Dan Sycheva, Mira Szuba, Marek Taylor, Kieron Thormann, Anja Threadgold, Glen Vullo, Alessandro Walts, Brandon Winterbottom, Andrea Zadissa, Amonida Chakiachvili, Marc Flint, Bethany Frankish, Adam Hunt, Sarah E IIsley, Garth Kostadima, Myrto Langridge, Nick Loveland, Jane E Martin, Fergal J Morales, Joannella Mudge, Jonathan M Muffato, Matthieu Perry, Emily Ruffier, Magali Trevanion, Stephen J Cunningham, Fiona Howe, Kevin L Zerbino, Daniel R Flicek, Paul Nucleic Acids Research Ensembl 2020 Genetics |
| author_sort |
yates, andrew d |
| spelling |
Yates, Andrew D Achuthan, Premanand Akanni, Wasiu Allen, James Allen, Jamie Alvarez-Jarreta, Jorge Amode, M Ridwan Armean, Irina M Azov, Andrey G Bennett, Ruth Bhai, Jyothish Billis, Konstantinos Boddu, Sanjay Marugán, José Carlos Cummins, Carla Davidson, Claire Dodiya, Kamalkumar Fatima, Reham Gall, Astrid Giron, Carlos Garcia Gil, Laurent Grego, Tiago Haggerty, Leanne Haskell, Erin Hourlier, Thibaut Izuogu, Osagie G Janacek, Sophie H Juettemann, Thomas Kay, Mike Lavidas, Ilias Le, Tuan Lemos, Diana Martinez, Jose Gonzalez Maurel, Thomas McDowall, Mark McMahon, Aoife Mohanan, Shamika Moore, Benjamin Nuhn, Michael Oheh, Denye N Parker, Anne Parton, Andrew Patricio, Mateus Sakthivel, Manoj Pandian Abdul Salam, Ahamed Imran Schmitt, Bianca M Schuilenburg, Helen Sheppard, Dan Sycheva, Mira Szuba, Marek Taylor, Kieron Thormann, Anja Threadgold, Glen Vullo, Alessandro Walts, Brandon Winterbottom, Andrea Zadissa, Amonida Chakiachvili, Marc Flint, Bethany Frankish, Adam Hunt, Sarah E IIsley, Garth Kostadima, Myrto Langridge, Nick Loveland, Jane E Martin, Fergal J Morales, Joannella Mudge, Jonathan M Muffato, Matthieu Perry, Emily Ruffier, Magali Trevanion, Stephen J Cunningham, Fiona Howe, Kevin L Zerbino, Daniel R Flicek, Paul 0305-1048 1362-4962 Oxford University Press (OUP) Genetics http://dx.doi.org/10.1093/nar/gkz966 <jats:title>Abstract</jats:title> <jats:p>The Ensembl (https://www.ensembl.org) is a system for generating and distributing genome annotation such as genes, variation, regulation and comparative genomics across the vertebrate subphylum and key model organisms. The Ensembl annotation pipeline is capable of integrating experimental and reference data from multiple providers into a single integrated resource. Here, we present 94 newly annotated and re-annotated genomes, bringing the total number of genomes offered by Ensembl to 227. This represents the single largest expansion of the resource since its inception. We also detail our continued efforts to improve human annotation, developments in our epigenome analysis and display, a new tool for imputing causal genes from genome-wide association studies and visualisation of variation within a 3D protein model. Finally, we present information on our new website. Both software and data are made available without restriction via our website, online tools platform and programmatic interfaces (available under an Apache 2.0 license) and data updates made available four times a year.</jats:p> Ensembl 2020 Nucleic Acids Research |
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| title |
Ensembl 2020 |
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Ensembl 2020 |
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Ensembl 2020 |
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Ensembl 2020 |
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Ensembl 2020 |
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Ensembl 2020 |
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ensembl 2020 |
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Genetics |
| url |
http://dx.doi.org/10.1093/nar/gkz966 |
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2019 |
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<jats:title>Abstract</jats:title>
<jats:p>The Ensembl (https://www.ensembl.org) is a system for generating and distributing genome annotation such as genes, variation, regulation and comparative genomics across the vertebrate subphylum and key model organisms. The Ensembl annotation pipeline is capable of integrating experimental and reference data from multiple providers into a single integrated resource. Here, we present 94 newly annotated and re-annotated genomes, bringing the total number of genomes offered by Ensembl to 227. This represents the single largest expansion of the resource since its inception. We also detail our continued efforts to improve human annotation, developments in our epigenome analysis and display, a new tool for imputing causal genes from genome-wide association studies and visualisation of variation within a 3D protein model. Finally, we present information on our new website. Both software and data are made available without restriction via our website, online tools platform and programmatic interfaces (available under an Apache 2.0 license) and data updates made available four times a year.</jats:p> |
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| author | Yates, Andrew D, Achuthan, Premanand, Akanni, Wasiu, Allen, James, Allen, Jamie, Alvarez-Jarreta, Jorge, Amode, M Ridwan, Armean, Irina M, Azov, Andrey G, Bennett, Ruth, Bhai, Jyothish, Billis, Konstantinos, Boddu, Sanjay, Marugán, José Carlos, Cummins, Carla, Davidson, Claire, Dodiya, Kamalkumar, Fatima, Reham, Gall, Astrid, Giron, Carlos Garcia, Gil, Laurent, Grego, Tiago, Haggerty, Leanne, Haskell, Erin, Hourlier, Thibaut, Izuogu, Osagie G, Janacek, Sophie H, Juettemann, Thomas, Kay, Mike, Lavidas, Ilias, Le, Tuan, Lemos, Diana, Martinez, Jose Gonzalez, Maurel, Thomas, McDowall, Mark, McMahon, Aoife, Mohanan, Shamika, Moore, Benjamin, Nuhn, Michael, Oheh, Denye N, Parker, Anne, Parton, Andrew, Patricio, Mateus, Sakthivel, Manoj Pandian, Abdul Salam, Ahamed Imran, Schmitt, Bianca M, Schuilenburg, Helen, Sheppard, Dan, Sycheva, Mira, Szuba, Marek, Taylor, Kieron, Thormann, Anja, Threadgold, Glen, Vullo, Alessandro, Walts, Brandon, Winterbottom, Andrea, Zadissa, Amonida, Chakiachvili, Marc, Flint, Bethany, Frankish, Adam, Hunt, Sarah E, IIsley, Garth, Kostadima, Myrto, Langridge, Nick, Loveland, Jane E, Martin, Fergal J, Morales, Joannella, Mudge, Jonathan M, Muffato, Matthieu, Perry, Emily, Ruffier, Magali, Trevanion, Stephen J, Cunningham, Fiona, Howe, Kevin L, Zerbino, Daniel R, Flicek, Paul |
| author_facet | Yates, Andrew D, Achuthan, Premanand, Akanni, Wasiu, Allen, James, Allen, Jamie, Alvarez-Jarreta, Jorge, Amode, M Ridwan, Armean, Irina M, Azov, Andrey G, Bennett, Ruth, Bhai, Jyothish, Billis, Konstantinos, Boddu, Sanjay, Marugán, José Carlos, Cummins, Carla, Davidson, Claire, Dodiya, Kamalkumar, Fatima, Reham, Gall, Astrid, Giron, Carlos Garcia, Gil, Laurent, Grego, Tiago, Haggerty, Leanne, Haskell, Erin, Hourlier, Thibaut, Izuogu, Osagie G, Janacek, Sophie H, Juettemann, Thomas, Kay, Mike, Lavidas, Ilias, Le, Tuan, Lemos, Diana, Martinez, Jose Gonzalez, Maurel, Thomas, McDowall, Mark, McMahon, Aoife, Mohanan, Shamika, Moore, Benjamin, Nuhn, Michael, Oheh, Denye N, Parker, Anne, Parton, Andrew, Patricio, Mateus, Sakthivel, Manoj Pandian, Abdul Salam, Ahamed Imran, Schmitt, Bianca M, Schuilenburg, Helen, Sheppard, Dan, Sycheva, Mira, Szuba, Marek, Taylor, Kieron, Thormann, Anja, Threadgold, Glen, Vullo, Alessandro, Walts, Brandon, Winterbottom, Andrea, Zadissa, Amonida, Chakiachvili, Marc, Flint, Bethany, Frankish, Adam, Hunt, Sarah E, IIsley, Garth, Kostadima, Myrto, Langridge, Nick, Loveland, Jane E, Martin, Fergal J, Morales, Joannella, Mudge, Jonathan M, Muffato, Matthieu, Perry, Emily, Ruffier, Magali, Trevanion, Stephen J, Cunningham, Fiona, Howe, Kevin L, Zerbino, Daniel R, Flicek, Paul, Yates, Andrew D, Achuthan, Premanand, Akanni, Wasiu, Allen, James, Allen, Jamie, Alvarez-Jarreta, Jorge, Amode, M Ridwan, Armean, Irina M, Azov, Andrey G, Bennett, Ruth, Bhai, Jyothish, Billis, Konstantinos, Boddu, Sanjay, Marugán, José Carlos, Cummins, Carla, Davidson, Claire, Dodiya, Kamalkumar, Fatima, Reham, Gall, Astrid, Giron, Carlos Garcia, Gil, Laurent, Grego, Tiago, Haggerty, Leanne, Haskell, Erin, Hourlier, Thibaut, Izuogu, Osagie G, Janacek, Sophie H, Juettemann, Thomas, Kay, Mike, Lavidas, Ilias, Le, Tuan, Lemos, Diana, Martinez, Jose Gonzalez, Maurel, Thomas, McDowall, Mark, McMahon, Aoife, Mohanan, Shamika, Moore, Benjamin, Nuhn, Michael, Oheh, Denye N, Parker, Anne, Parton, Andrew, Patricio, Mateus, Sakthivel, Manoj Pandian, Abdul Salam, Ahamed Imran, Schmitt, Bianca M, Schuilenburg, Helen, Sheppard, Dan, Sycheva, Mira, Szuba, Marek, Taylor, Kieron, Thormann, Anja, Threadgold, Glen, Vullo, Alessandro, Walts, Brandon, Winterbottom, Andrea, Zadissa, Amonida, Chakiachvili, Marc, Flint, Bethany, Frankish, Adam, Hunt, Sarah E, IIsley, Garth, Kostadima, Myrto, Langridge, Nick, Loveland, Jane E, Martin, Fergal J, Morales, Joannella, Mudge, Jonathan M, Muffato, Matthieu, Perry, Emily, Ruffier, Magali, Trevanion, Stephen J, Cunningham, Fiona, Howe, Kevin L, Zerbino, Daniel R, Flicek, Paul |
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| description | <jats:title>Abstract</jats:title> <jats:p>The Ensembl (https://www.ensembl.org) is a system for generating and distributing genome annotation such as genes, variation, regulation and comparative genomics across the vertebrate subphylum and key model organisms. The Ensembl annotation pipeline is capable of integrating experimental and reference data from multiple providers into a single integrated resource. Here, we present 94 newly annotated and re-annotated genomes, bringing the total number of genomes offered by Ensembl to 227. This represents the single largest expansion of the resource since its inception. We also detail our continued efforts to improve human annotation, developments in our epigenome analysis and display, a new tool for imputing causal genes from genome-wide association studies and visualisation of variation within a 3D protein model. Finally, we present information on our new website. Both software and data are made available without restriction via our website, online tools platform and programmatic interfaces (available under an Apache 2.0 license) and data updates made available four times a year.</jats:p> |
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| spelling | Yates, Andrew D Achuthan, Premanand Akanni, Wasiu Allen, James Allen, Jamie Alvarez-Jarreta, Jorge Amode, M Ridwan Armean, Irina M Azov, Andrey G Bennett, Ruth Bhai, Jyothish Billis, Konstantinos Boddu, Sanjay Marugán, José Carlos Cummins, Carla Davidson, Claire Dodiya, Kamalkumar Fatima, Reham Gall, Astrid Giron, Carlos Garcia Gil, Laurent Grego, Tiago Haggerty, Leanne Haskell, Erin Hourlier, Thibaut Izuogu, Osagie G Janacek, Sophie H Juettemann, Thomas Kay, Mike Lavidas, Ilias Le, Tuan Lemos, Diana Martinez, Jose Gonzalez Maurel, Thomas McDowall, Mark McMahon, Aoife Mohanan, Shamika Moore, Benjamin Nuhn, Michael Oheh, Denye N Parker, Anne Parton, Andrew Patricio, Mateus Sakthivel, Manoj Pandian Abdul Salam, Ahamed Imran Schmitt, Bianca M Schuilenburg, Helen Sheppard, Dan Sycheva, Mira Szuba, Marek Taylor, Kieron Thormann, Anja Threadgold, Glen Vullo, Alessandro Walts, Brandon Winterbottom, Andrea Zadissa, Amonida Chakiachvili, Marc Flint, Bethany Frankish, Adam Hunt, Sarah E IIsley, Garth Kostadima, Myrto Langridge, Nick Loveland, Jane E Martin, Fergal J Morales, Joannella Mudge, Jonathan M Muffato, Matthieu Perry, Emily Ruffier, Magali Trevanion, Stephen J Cunningham, Fiona Howe, Kevin L Zerbino, Daniel R Flicek, Paul 0305-1048 1362-4962 Oxford University Press (OUP) Genetics http://dx.doi.org/10.1093/nar/gkz966 <jats:title>Abstract</jats:title> <jats:p>The Ensembl (https://www.ensembl.org) is a system for generating and distributing genome annotation such as genes, variation, regulation and comparative genomics across the vertebrate subphylum and key model organisms. The Ensembl annotation pipeline is capable of integrating experimental and reference data from multiple providers into a single integrated resource. Here, we present 94 newly annotated and re-annotated genomes, bringing the total number of genomes offered by Ensembl to 227. This represents the single largest expansion of the resource since its inception. We also detail our continued efforts to improve human annotation, developments in our epigenome analysis and display, a new tool for imputing causal genes from genome-wide association studies and visualisation of variation within a 3D protein model. Finally, we present information on our new website. Both software and data are made available without restriction via our website, online tools platform and programmatic interfaces (available under an Apache 2.0 license) and data updates made available four times a year.</jats:p> Ensembl 2020 Nucleic Acids Research |
| spellingShingle | Yates, Andrew D, Achuthan, Premanand, Akanni, Wasiu, Allen, James, Allen, Jamie, Alvarez-Jarreta, Jorge, Amode, M Ridwan, Armean, Irina M, Azov, Andrey G, Bennett, Ruth, Bhai, Jyothish, Billis, Konstantinos, Boddu, Sanjay, Marugán, José Carlos, Cummins, Carla, Davidson, Claire, Dodiya, Kamalkumar, Fatima, Reham, Gall, Astrid, Giron, Carlos Garcia, Gil, Laurent, Grego, Tiago, Haggerty, Leanne, Haskell, Erin, Hourlier, Thibaut, Izuogu, Osagie G, Janacek, Sophie H, Juettemann, Thomas, Kay, Mike, Lavidas, Ilias, Le, Tuan, Lemos, Diana, Martinez, Jose Gonzalez, Maurel, Thomas, McDowall, Mark, McMahon, Aoife, Mohanan, Shamika, Moore, Benjamin, Nuhn, Michael, Oheh, Denye N, Parker, Anne, Parton, Andrew, Patricio, Mateus, Sakthivel, Manoj Pandian, Abdul Salam, Ahamed Imran, Schmitt, Bianca M, Schuilenburg, Helen, Sheppard, Dan, Sycheva, Mira, Szuba, Marek, Taylor, Kieron, Thormann, Anja, Threadgold, Glen, Vullo, Alessandro, Walts, Brandon, Winterbottom, Andrea, Zadissa, Amonida, Chakiachvili, Marc, Flint, Bethany, Frankish, Adam, Hunt, Sarah E, IIsley, Garth, Kostadima, Myrto, Langridge, Nick, Loveland, Jane E, Martin, Fergal J, Morales, Joannella, Mudge, Jonathan M, Muffato, Matthieu, Perry, Emily, Ruffier, Magali, Trevanion, Stephen J, Cunningham, Fiona, Howe, Kevin L, Zerbino, Daniel R, Flicek, Paul, Nucleic Acids Research, Ensembl 2020, Genetics |
| title | Ensembl 2020 |
| title_full | Ensembl 2020 |
| title_fullStr | Ensembl 2020 |
| title_full_unstemmed | Ensembl 2020 |
| title_short | Ensembl 2020 |
| title_sort | ensembl 2020 |
| title_unstemmed | Ensembl 2020 |
| topic | Genetics |
| url | http://dx.doi.org/10.1093/nar/gkz966 |