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HCGene: a software tool to support the hierarchical classification of genes
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| Zeitschriftentitel: | Bioinformatics |
|---|---|
| Personen und Körperschaften: | , |
| In: | Bioinformatics, 24, 2008, 5, S. 729-731 |
| Format: | E-Article |
| Sprache: | Englisch |
| veröffentlicht: |
Oxford University Press (OUP)
|
| Schlagwörter: |
| author_facet |
Valentini, Giorgio Cesa-Bianchi, Nicolò Valentini, Giorgio Cesa-Bianchi, Nicolò |
|---|---|
| author |
Valentini, Giorgio Cesa-Bianchi, Nicolò |
| spellingShingle |
Valentini, Giorgio Cesa-Bianchi, Nicolò Bioinformatics HCGene: a software tool to support the hierarchical classification of genes Computational Mathematics Computational Theory and Mathematics Computer Science Applications Molecular Biology Biochemistry Statistics and Probability |
| author_sort |
valentini, giorgio |
| spelling |
Valentini, Giorgio Cesa-Bianchi, Nicolò 1367-4811 1367-4803 Oxford University Press (OUP) Computational Mathematics Computational Theory and Mathematics Computer Science Applications Molecular Biology Biochemistry Statistics and Probability http://dx.doi.org/10.1093/bioinformatics/btn015 <jats:title>Abstract</jats:title> <jats:p>Summary: The R package HCGene (Hierarchical Classification of Genes) implements methods to process and analyze the Gene Ontology and the FunCat taxonomy in order to support the functional classification of genes. HCGene allows the extraction of subgraphs and subtrees related to specific biological problems, the labeling of genes and gene products with multiple and hierarchical functional classes, and the association of different types of bio-molecular data to genes for learning to predict their functions.</jats:p> <jats:p>Availability: http://homes.dsi.unimi.it/~valenti/SW/hcgene/download/hcgene_1.0.tar.gz</jats:p> <jats:p>Contact: valentini@dsi.unimi.it</jats:p> <jats:p>Supplementary information: Supplementary data are available at http://homes.dsi.unimi.it/~valenti/SW/hcgene</jats:p> HCGene: a software tool to support the hierarchical classification of genes Bioinformatics |
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HCGene: a software tool to support the hierarchical classification of genes |
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HCGene: a software tool to support the hierarchical classification of genes |
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HCGene: a software tool to support the hierarchical classification of genes |
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HCGene: a software tool to support the hierarchical classification of genes |
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HCGene: a software tool to support the hierarchical classification of genes |
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HCGene: a software tool to support the hierarchical classification of genes |
| title_sort |
hcgene: a software tool to support the hierarchical classification of genes |
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Computational Mathematics Computational Theory and Mathematics Computer Science Applications Molecular Biology Biochemistry Statistics and Probability |
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http://dx.doi.org/10.1093/bioinformatics/btn015 |
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2008 |
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729-731 |
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<jats:title>Abstract</jats:title>
<jats:p>Summary: The R package HCGene (Hierarchical Classification of Genes) implements methods to process and analyze the Gene Ontology and the FunCat taxonomy in order to support the functional classification of genes. HCGene allows the extraction of subgraphs and subtrees related to specific biological problems, the labeling of genes and gene products with multiple and hierarchical functional classes, and the association of different types of bio-molecular data to genes for learning to predict their functions.</jats:p>
<jats:p>Availability: http://homes.dsi.unimi.it/~valenti/SW/hcgene/download/hcgene_1.0.tar.gz</jats:p>
<jats:p>Contact: valentini@dsi.unimi.it</jats:p>
<jats:p>Supplementary information: Supplementary data are available at http://homes.dsi.unimi.it/~valenti/SW/hcgene</jats:p> |
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| description | <jats:title>Abstract</jats:title> <jats:p>Summary: The R package HCGene (Hierarchical Classification of Genes) implements methods to process and analyze the Gene Ontology and the FunCat taxonomy in order to support the functional classification of genes. HCGene allows the extraction of subgraphs and subtrees related to specific biological problems, the labeling of genes and gene products with multiple and hierarchical functional classes, and the association of different types of bio-molecular data to genes for learning to predict their functions.</jats:p> <jats:p>Availability: http://homes.dsi.unimi.it/~valenti/SW/hcgene/download/hcgene_1.0.tar.gz</jats:p> <jats:p>Contact: valentini@dsi.unimi.it</jats:p> <jats:p>Supplementary information: Supplementary data are available at http://homes.dsi.unimi.it/~valenti/SW/hcgene</jats:p> |
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| spelling | Valentini, Giorgio Cesa-Bianchi, Nicolò 1367-4811 1367-4803 Oxford University Press (OUP) Computational Mathematics Computational Theory and Mathematics Computer Science Applications Molecular Biology Biochemistry Statistics and Probability http://dx.doi.org/10.1093/bioinformatics/btn015 <jats:title>Abstract</jats:title> <jats:p>Summary: The R package HCGene (Hierarchical Classification of Genes) implements methods to process and analyze the Gene Ontology and the FunCat taxonomy in order to support the functional classification of genes. HCGene allows the extraction of subgraphs and subtrees related to specific biological problems, the labeling of genes and gene products with multiple and hierarchical functional classes, and the association of different types of bio-molecular data to genes for learning to predict their functions.</jats:p> <jats:p>Availability: http://homes.dsi.unimi.it/~valenti/SW/hcgene/download/hcgene_1.0.tar.gz</jats:p> <jats:p>Contact: valentini@dsi.unimi.it</jats:p> <jats:p>Supplementary information: Supplementary data are available at http://homes.dsi.unimi.it/~valenti/SW/hcgene</jats:p> HCGene: a software tool to support the hierarchical classification of genes Bioinformatics |
| spellingShingle | Valentini, Giorgio, Cesa-Bianchi, Nicolò, Bioinformatics, HCGene: a software tool to support the hierarchical classification of genes, Computational Mathematics, Computational Theory and Mathematics, Computer Science Applications, Molecular Biology, Biochemistry, Statistics and Probability |
| title | HCGene: a software tool to support the hierarchical classification of genes |
| title_full | HCGene: a software tool to support the hierarchical classification of genes |
| title_fullStr | HCGene: a software tool to support the hierarchical classification of genes |
| title_full_unstemmed | HCGene: a software tool to support the hierarchical classification of genes |
| title_short | HCGene: a software tool to support the hierarchical classification of genes |
| title_sort | hcgene: a software tool to support the hierarchical classification of genes |
| title_unstemmed | HCGene: a software tool to support the hierarchical classification of genes |
| topic | Computational Mathematics, Computational Theory and Mathematics, Computer Science Applications, Molecular Biology, Biochemistry, Statistics and Probability |
| url | http://dx.doi.org/10.1093/bioinformatics/btn015 |